vermouth.processors.cif_reader module¶ Provides a processor that reads a CIF file. See also vermouth.pdb.cif class vermouth.processors.cif_reader.CIFInput(filename, exclude=(), ignh=False, modelidx=0)[source]¶ Bases: Processor Reads CIF files. filename¶ The filename to parse. Type: str exclude¶ A collection of residue names that should not be parsed and excluded from the final molecule(s) Type: collections.abc.Container[str] ignh¶ If True, hydrogens will be discarded from the input structure. Type: bool modelidx¶ If the cif file contains multiple models, which one to select. Type: int See also read_cif_file() run_system(system)[source]¶