vermouth.processors package¶

Submodules¶

  • vermouth.processors.add_molecule_edges module
  • vermouth.processors.annotate_mut_mod module
  • vermouth.processors.apply_posres module
  • vermouth.processors.apply_rubber_band module
  • vermouth.processors.attach_mass module
  • vermouth.processors.average_beads module
  • vermouth.processors.canonicalize_modifications module
  • vermouth.processors.do_links module
  • vermouth.processors.do_mapping module
  • vermouth.processors.go_vs_includes module
  • vermouth.processors.gro_reader module
  • vermouth.processors.locate_charge_dummies module
  • vermouth.processors.make_bonds module
  • vermouth.processors.merge_all_molecules module
  • vermouth.processors.merge_chains module
  • vermouth.processors.name_moltype module
  • vermouth.processors.pdb_reader module
  • vermouth.processors.processor module
  • vermouth.processors.quote module
  • vermouth.processors.rename_modified_residues module
  • vermouth.processors.repair_graph module
  • vermouth.processors.set_molecule_meta module
  • vermouth.processors.sort_molecule_atoms module
  • vermouth.processors.tune_cystein_bridges module

Module contents¶

Provides Processors, VerMoUTH’s work horses.

VerMoUTH

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Contents:

  • General Overview
  • Martinize 2 workflow
  • Technical background
  • File formats
  • Tutorials
  • vermouth
    • vermouth package

Related Topics

  • Documentation overview
    • vermouth
      • vermouth package
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