vermouth.processors.merge_all_molecules module

Provides a processor that merges all the molecules from a system.

class vermouth.processors.merge_all_molecules.MergeAllMolecules[source]

Bases: Processor

Merge all the molecules from a system.

The molecules are merged into the first molecule of the system. Nothing is done if there are no molecules.

static run_molecule(molecule)[source]
run_system(system)[source]