vermouth.processors.rename_modified_residues module¶
Provides a processor that renames residues based on their current residue names and identified modifications, such as PTMs.
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vermouth.processors.rename_modified_residues.
rename_modified_residues
(mol)[source]¶ Renames residue names based on the current residue name, and the found modifications. The new names are found in force_field.renamed_residues, which should be a mapping of
{(rename, [modification_name, ...]): new_name}
.Parameters: mol (Molecule) – The molecule whose residue names should be changed. Is modified in-place.