Welcome to VerMoUTH’s documentation!
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Contents:
General Overview
Installation instructions
Quickstart
General layout
Citing
References
Martinize 2 workflow
Pipeline
1) Read input files
2) Repair the input graph
3) Resolution transformation
4) Apply Links
5) Post processing
6) Write output
Technical background
Processor
Data
Graph algorithms
File formats
.ff file format
.mapping file format
Tutorials
Atomistic protein in solution
Coarse-grained protein in solution
Transmembrane protein
PAMAM: a hyperbranched polymer
A glycosylated protein
Adding new residues and links
Adding new modifications
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Indices and tables
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Index
Module Index
Search Page
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Contents:
General Overview
Martinize 2 workflow
Technical background
File formats
Tutorials
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